SubtiBank SubtiBank
ywdF [2019-06-21 09:49:02]
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ywdF [2019-06-21 09:49:02]

similar to glycosyltransferase
locus
BSU37980
pI
5.02
mw
30.47 kDa
protein length
268 aa Sequence Blast
gene length
807 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
ipa-56d
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    3,898,376 3,899,182

    The protein

    Protein family

  • [SW|glycosyltransferase 2 family] (according to Swiss-Prot)

    • Structure

  • [PDB|5HEA] (from Streptococcus parasanguinis,corresponds to aa 3 ... 125, 32% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|1DA87B205F2E201DE027209620110D043AF8A6AF|ywdF]-[gene|DC73C11C3C54D35B2D9A0A28666A29E36451E7F8|ung]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • BKE37980 ([gene|1DA87B205F2E201DE027209620110D043AF8A6AF|ywdF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE37980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATGCTCTCCTTCTCAT, downstream forward: _UP4_CATCGTTCGTAAGGAGGCCT
  • BKK37980 ([gene|1DA87B205F2E201DE027209620110D043AF8A6AF|ywdF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK37980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATGCTCTCCTTCTCAT, downstream forward: _UP4_CATCGTTCGTAAGGAGGCCT